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    • OLego: Fast and Sensitive Mapping of Spliced mRNA-Seq Reads Using Small Seeds 

      Wu, Jie; Anczuk©w, Olga; Krainer, Adrian R.; Zhang, Michael Q.; Zhang, Chaolin (Oxford University Press, 2013-04)
      A crucial step in analyzing mRNA-Seq data is to accurately and efficiently map hundreds of millions of reads to the reference genome and exon junctions. Here we present OLego, an algorithm specifically designed for de novo ...